„HPC software” változatai közötti eltérés

Innen: KIFÜ Wiki
a
 
(25 közbenső módosítás, amit 3 másik szerkesztő végzett, nincs mutatva)
1. sor: 1. sor:
 +
The current version of software on specific machines might be higher than described here. We are encouraging all users to install other tools to be used on our servers if service AUP and license restrictions are respected.
 +
 
{| class="wikitable" border="1" style="text-align:center;"
 
{| class="wikitable" border="1" style="text-align:center;"
  
 
|-
 
|-
−
!Szoftver komponens
+
!Software component
 
!Debrecen
 
!Debrecen
 
!Pécs
 
!Pécs
8. sor: 10. sor:
 
!Budapest
 
!Budapest
 
!Budapest2
 
!Budapest2
−
!Debrecen2,3
+
!Debrecen2,3 (Leo, Apollo)
 
!Miskolc
 
!Miskolc
 
|-
 
|-
−
| colspan=8| '''Fejlesztő környezet (fordító, debugger, profiler)'''
+
| colspan=8| '''Compiler environment (compiler, debugger, profiler)'''
 
|-
 
|-
−
| [http://developer.amd.com/tools-and-sdks/cpu-development/x86-open64-compiler-suite/ AMD fordítók ((opencc, openf90, openf95))] || colspan=2|-||colspan=2|Telepítve||colspan=3|-
+
| AMD [http://developer.amd.com/tools-and-sdks/cpu-development/x86-open64-compiler-suite/ compilers ((opencc, openf90, openf95))] || colspan=2|-||colspan=2|Available||colspan=3|-
 
|-
 
|-
−
| Matematikai könyvtár (AMD) [http://developer.amd.com/tools/cpu-development/amd-core-math-library-acml ACML] ||colspan=2|-||colspan=2|4.2.4||colspan=3|-
+
| Math. Library (AMD) [http://developer.amd.com/tools/cpu-development/amd-core-math-library-acml ACML] ||colspan=2|-||colspan=2|4.2.4||colspan=3|-
 
|-
 
|-
 
| [http://sources.redhat.com/gdb/ GDB] || colspan=2|7|| colspan=2|7.0.1|| colspan=2|7.2||7.5
 
| [http://sources.redhat.com/gdb/ GDB] || colspan=2|7|| colspan=2|7.0.1|| colspan=2|7.2||7.5
 
|-
 
|-
−
| [http://gcc.gnu.org/ GNU fordítók (gcc, g++, gfortran)]||4,3||4.1.2 || colspan=2|4.1.2, 4.4.4|| colspan=2|4.4.7|| 4.3.4
+
| [http://gcc.gnu.org/ GNU compilers (gcc, g++, gfortran)]||4.3||4.1.2 || colspan=2|4.1.2, 4.4.4|| colspan=2|4.4.7|| 4.8.5
 
|-
 
|-
−
| Gprof|| colspan=2|2,2|| colspan=2|2,17|| colspan=2|2.20|| 2.23
+
| Gprof|| colspan=2|2.2|| colspan=2|2.17|| colspan=2|2.20|| 2.26.1
 
|-
 
|-
−
| [http://software.intel.com/en-us/articles/intel-composer-xe/ Intel fordítók (icc, ifort)] ||colspan=2|12.1.5 (composerxe-2011 Update 11) ||colspan=2|-|| colspan=3|16.0
+
| Intel [http://software.intel.com/en-us/articles/intel-composer-xe/ compilers (icc, ifort)], [http://software.intel.com/en-us/articles/intel-math-kernel-library-documentation/ MKL],  [http://software.intel.com/en-us/articles/intel-mkl-link-line-advisor/ Linking] ||colspan=2|12.1.5 (composerxe-2011 Update 11) ||colspan=2|-|| colspan=3|16.0
−
|-
 
−
| Matematikai könyvtár (Intel): [http://software.intel.com/en-us/articles/intel-math-kernel-library-documentation/ Intel MKL] ||colspan=2|12.1.5 (composerxe-2011 Update 11) ||colspan=2|-|| colspan=3|16.0
 
−
|-
 
−
| [http://software.intel.com/en-us/articles/intel-mkl-link-line-advisor/ MKL linking] ||colspan=2|12.1.5 (composerxe-2011 Update 11) ||colspan=2|-|| colspan=3|16.0
 
 
|-  
 
|-  
 
| [http://oprofile.sourceforge.net/ Oprofile] ||  colspan=3|- ||0.9.4||colspan=3|-
 
| [http://oprofile.sourceforge.net/ Oprofile] ||  colspan=3|- ||0.9.4||colspan=3|-
 
|-  
 
|-  
−
| colspan=8|'''Párhuzamosításhoz felhasználható függvénykönyvtárak'''
+
| colspan=8|'''Libraries supporting parallel development'''
 
|-  
 
|-  
 
| LAM-MPI ||colspan=2|- ||colspan=2|7.1.2||colspan=3|-
 
| LAM-MPI ||colspan=2|- ||colspan=2|7.1.2||colspan=3|-
 
|-  
 
|-  
−
| MPICH2 ||colspan=2|1,4||colspan=2|1,2||colspan=3|-
+
| MPICH2 ||colspan=2|1.4||colspan=2|1.2||colspan=3|-
 
|-  
 
|-  
 
| [http://openmp.org/ OpenMP]||colspan=2|2.5 (GNU), 3.0 (Intel)||colspan=2|2.5 (GNU), 2.5 (AMD) ||colspan=3|2.5 (GNU), 3.0 (Intel)
 
| [http://openmp.org/ OpenMP]||colspan=2|2.5 (GNU), 3.0 (Intel)||colspan=2|2.5 (GNU), 2.5 (AMD) ||colspan=3|2.5 (GNU), 3.0 (Intel)
43. sor: 41. sor:
 
| [http://www.csm.ornl.gov/pvm/ PVM] ||colspan=4|3.4.5 ||colspan=3|-
 
| [http://www.csm.ornl.gov/pvm/ PVM] ||colspan=4|3.4.5 ||colspan=3|-
 
|-  
 
|-  
−
| [http://techpubs.sgi.com/library/manuals/3000/007-3773-003/pdf/007-3773-003.pdf SGI-MPI (MPT)] ||colspan=2|2,04||colspan=2|-||colspan=2|-||2.12
+
| [http://videotorium.hu/hu/recordings/details/12291,Overview_and_usage_of_the_SGI_HPC_softwares_on_the_SGI_ICE_and_SGI_UV_supercomputers SGI Perf. Suite] ||colspan=2|Available||colspan=2|-||colspan=2|-||Available
 +
|-  
 +
| SGI-MPI (MPT) ||colspan=2|2.04||colspan=2|-||colspan=2|-||2.13
 
|-  
 
|-  
−
| colspan=8|'''Tudományos számításokhoz felhasználható függvénykönyvtárak'''
+
| PGI Compiler and Tools ||colspan=5|-|| 15.10 || -
 
|-  
 
|-  
 +
| colspan=8|'''Libraries supporting scientific work'''
 +
|-
 +
| AmberTool || 16 ||colspan=6|-
 +
|-
 
| Atlas ||colspan=4|3.8.3||colspan=3|-
 
| Atlas ||colspan=4|3.8.3||colspan=3|-
 
|-  
 
|-  
−
| BLACS ||colspan=4|1.1 (OpenMPI, MPICH2) ||colspan=3|-
+
| BLACS ||colspan=4|1.1 (OpenMPI, MPICH2) ||1.1 (OpenMPI Intel)||3.1.3||-
 
|-  
 
|-  
−
| BLAS ||colspan=2|3.2.2 ||colspan=2|3||colspan=2|-||3
+
| BLAS ||colspan=2|3.2.2 ||colspan=2|3||3.6.1||-||3
 
|-  
 
|-  
−
| Boost||colspan=2|1,36||colspan=2|1,33||colspan=3|-
+
| Boost||colspan=2|1.36||colspan=2|1.33||colspan=3|-
 
|-  
 
|-  
−
| FFTW ||colspan=2|3.1.2 ||colspan=2|3.2.2||colspan=2|-||3.3.3
+
| FFTW ||colspan=2|3.1.2 ||colspan=2|3.2.2||3.3.5 ||3.3.4||3.3.3
 
|-  
 
|-  
−
| Gromacs ||colspan=2|4.5.4 ||colspan=2|4.5.5||colspan=2|-||4.6.2
+
| [http://www.gromacs.org/ Gromacs] ||colspan=2|4.5.4 ||colspan=2|4.5.5||-||5.1.4 ||4.6.2
 
|-  
 
|-  
 
| GUILE ||colspan=2|1.8.5 ||colspan=2|-||colspan=2|-||1.8.8
 
| GUILE ||colspan=2|1.8.5 ||colspan=2|-||colspan=2|-||1.8.8
 
|-  
 
|-  
−
| HDF5 ||colspan=2|1.8.7||colspan=2|-||colspan=2|1.8.17||-
+
| HDF5 ||colspan=2|1.8.7||colspan=2|-||colspan=2|1.8.14||-
 
|-  
 
|-  
−
| Lapack ||colspan=2|3.2.2 ||colspan=2|3 ||colspan=3|-
+
| LAMMPS ||colspan=4|-||16.05.14 (Phi)||16.05.14 (GPU, Phi)||-
 +
|-
 +
| Lapack ||colspan=2|3.2.2 ||colspan=2|3 ||3.6.1 ||colspan=2|-
 
|-  
 
|-  
 
| [http://www.maplesoft.com/ Maple] ||colspan=2| - ||colspan=2|18||-||2015||-
 
| [http://www.maplesoft.com/ Maple] ||colspan=2| - ||colspan=2|18||-||2015||-
 
|-  
 
|-  
−
| [http://www.niif.hu/node/645 Matlab] ||colspan=2|7.13.0 (R2011b)|| colspan=2|-||-||2015b||-
+
| [https://wiki.niif.hu/index.php?title=NIIF_szuperszámítógépek_használata#Matlab_feladatok Matlab] ||colspan=2|7.13.0 (R2011b)|| colspan=2|-||-||R2015b||-
 +
|-
 +
| NetCDF ||4.1.3 ||- ||colspan=2|4.2.1.1||4.4.1||4.3.3.1||-
 +
|-
 +
| NumPy ||colspan=2|1.3||colspan=2|1.7.1||1.11.2 ||-||1.7.0
 +
|-
 +
| PETSc||colspan=4|-||3.7.4 Intel||colspan=2|-
 
|-  
 
|-  
−
| NumPy ||colspan=2|1,3||colspan=2|1.5.1||colspan=2|-||1.7.0
+
| Python||colspan=4|2.7.5||3.5.2||colspan=2|-
 
|-  
 
|-  
−
| Octave ||colspan=2|3,4||colspan=2|3.0.5 ||colspan=3|-
+
| Octave ||colspan=2|3.4||colspan=2|3.0.5 ||colspan=3|-
 
|-  
 
|-  
 
| Qt||colspan=2|3.3.8b, 4.6.2||colspan=2|3.3.6 ||colspan=3|-
 
| Qt||colspan=2|3.3.8b, 4.6.2||colspan=2|3.3.6 ||colspan=3|-
 
|-  
 
|-  
−
| R ||colspan=2|2.8.1 ||colspan=2|-||colspan=2|-||3.0.1
+
| R ||2.8.1, 3.2.0, 3.2.5(Intel) || 2.8.1 ||colspan=2|-||colspan=2|-||3.0.1
 
|-  
 
|-  
−
| Scalapack||colspan=4|1.7.5||-||2.0.2||-
+
| Scalapack||colspan=4|1.7.5||colspan=2|2.0.2||-
 
|-  
 
|-  
 
| Scilab ||colspan=2|5.3.2||colspan=2|-||colspan=3|-
 
| Scilab ||colspan=2|5.3.2||colspan=2|-||colspan=3|-
 
|-  
 
|-  
−
| Sun JRE ||colspan=2|1,6||colspan=2|-||colspan=1|-||1.8||1.7
+
| Scipy||colspan=4|0.12.0||0.18.1 ||colspan=2|-
 +
|-
 +
| Sun JRE ||colspan=2|1.6||colspan=2|-||colspan=1|-||1.8||1.7
 
|-  
 
|-  
 
| Gaussian||colspan=3|09_REV_C.01||-||-||colspan=2|09_REV_D.01
 
| Gaussian||colspan=3|09_REV_C.01||-||-||colspan=2|09_REV_D.01
 
|-  
 
|-  
−
| colspan=8|'''Köztesrétegek'''
+
| colspan=8|'''Middleware'''
 
|-  
 
|-  
−
| [http://www.nordugrid.org/arc/ ARC grid köztesréteg] ||colspan=7|4.1.0 (A-REX, ARIS, kliensek))
+
| [http://www.nordugrid.org/arc/ ARC grid middleware] ||colspan=7|4.1.0 (A-REX, ARIS, clients))
 
|-  
 
|-  
−
| colspan=8|'''Egyéb szoftverek'''
+
| colspan=8|'''Miscellaneous software'''
 
|-  
 
|-  
−
| Emacs ||colspan=2|22,3||colspan=2|21,4||-||23.1.1||22.3.1
+
| Emacs ||colspan=2|22.3||colspan=2|21.4||-||23.1.1||22.3.1
 
|-  
 
|-  
 
| GNU Plot ||colspan=2|4.2.3 ||colspan=2|4||colspan=3|-
 
| GNU Plot ||colspan=2|4.2.3 ||colspan=2|4||colspan=3|-
97. sor: 111. sor:
 
| ImageMagick ||colspan=2|6.4.3 ||colspan=2|6.2.8||colspan=3|-
 
| ImageMagick ||colspan=2|6.4.3 ||colspan=2|6.2.8||colspan=3|-
 
|-  
 
|-  
−
| [http://www.virtualgl.org/About/TigerVNC Turbo VNC]||colspan=4|1,1||colspan=3|2
+
| [http://www.virtualgl.org/About/TigerVNC Turbo VNC]||colspan=4|1.1||colspan=3|2
 
|-  
 
|-  
−
| [http://www.blender.org/ Blender]||colspan=3|2,49||-||colspan=2|2.49||-
+
| [http://www.blender.org/ Blender]||colspan=3|2.49||-||colspan=2|2.49||-
 
|-  
 
|-  
 
| [http://www.virtualgl.org/ VirtualGL]||colspan=3|2.3.2||-||colspan=2|2.4||-
 
| [http://www.virtualgl.org/ VirtualGL]||colspan=3|2.3.2||-||colspan=2|2.4||-
107. sor: 121. sor:
 
| ffmpeg||colspan=2|-||colspan=2|0.4.9||colspan=3|-
 
| ffmpeg||colspan=2|-||colspan=2|0.4.9||colspan=3|-
 
|}
 
|}
 +
 +
[[Kategória: HPC]]

A lap jelenlegi, 2018. augusztus 3., 13:56-kori változata

The current version of software on specific machines might be higher than described here. We are encouraging all users to install other tools to be used on our servers if service AUP and license restrictions are respected.

Software component Debrecen Pécs Szeged Budapest Budapest2 Debrecen2,3 (Leo, Apollo) Miskolc
Compiler environment (compiler, debugger, profiler)
AMD compilers ((opencc, openf90, openf95)) - Available -
Math. Library (AMD) ACML - 4.2.4 -
GDB 7 7.0.1 7.2 7.5
GNU compilers (gcc, g++, gfortran) 4.3 4.1.2 4.1.2, 4.4.4 4.4.7 4.8.5
Gprof 2.2 2.17 2.20 2.26.1
Intel compilers (icc, ifort), MKL, Linking 12.1.5 (composerxe-2011 Update 11) - 16.0
Oprofile - 0.9.4 -
Libraries supporting parallel development
LAM-MPI - 7.1.2 -
MPICH2 1.4 1.2 -
OpenMP 2.5 (GNU), 3.0 (Intel) 2.5 (GNU), 2.5 (AMD) 2.5 (GNU), 3.0 (Intel)
OpenMPI 1.4.2 1.3.2 1.4.3 1.8.5 1.6.3
PVM 3.4.5 -
SGI Perf. Suite Available - - Available
SGI-MPI (MPT) 2.04 - - 2.13
PGI Compiler and Tools - 15.10 -
Libraries supporting scientific work
AmberTool 16 -
Atlas 3.8.3 -
BLACS 1.1 (OpenMPI, MPICH2) 1.1 (OpenMPI Intel) 3.1.3 -
BLAS 3.2.2 3 3.6.1 - 3
Boost 1.36 1.33 -
FFTW 3.1.2 3.2.2 3.3.5 3.3.4 3.3.3
Gromacs 4.5.4 4.5.5 - 5.1.4 4.6.2
GUILE 1.8.5 - - 1.8.8
HDF5 1.8.7 - 1.8.14 -
LAMMPS - 16.05.14 (Phi) 16.05.14 (GPU, Phi) -
Lapack 3.2.2 3 3.6.1 -
Maple - 18 - 2015 -
Matlab 7.13.0 (R2011b) - - R2015b -
NetCDF 4.1.3 - 4.2.1.1 4.4.1 4.3.3.1 -
NumPy 1.3 1.7.1 1.11.2 - 1.7.0
PETSc - 3.7.4 Intel -
Python 2.7.5 3.5.2 -
Octave 3.4 3.0.5 -
Qt 3.3.8b, 4.6.2 3.3.6 -
R 2.8.1, 3.2.0, 3.2.5(Intel) 2.8.1 - - 3.0.1
Scalapack 1.7.5 2.0.2 -
Scilab 5.3.2 - -
Scipy 0.12.0 0.18.1 -
Sun JRE 1.6 - - 1.8 1.7
Gaussian 09_REV_C.01 - - 09_REV_D.01
Middleware
ARC grid middleware 4.1.0 (A-REX, ARIS, clients))
Miscellaneous software
Emacs 22.3 21.4 - 23.1.1 22.3.1
GNU Plot 4.2.3 4 -
ImageMagick 6.4.3 6.2.8 -
Turbo VNC 1.1 2
Blender 2.49 - 2.49 -
VirtualGL 2.3.2 - 2.4 -
Paraview 3.14.1 - 3.14.1
ffmpeg - 0.4.9 -
A lap eredeti címe: „https://wiki.niif.hu/index.php?title=HPC_software&oldid=4358”